Jmol 11.7.45
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Jmol 11.7.45 Ranking & Summary
File size:
9.9 MB
Platform:
PPC/Intel
License:
Free
Price:
Downloads:
15
Date added:
2009-06-29
Publisher:
Jonathan Gutow
Jmol 11.7.45 description
- Cross-platform, running on Windows, Mac OS X, and Linux/Unix systems.
- The JmolApplet is a web browser applet that can be integrated into web pages.
- The Jmol application is a standalone Java application that runs on the desktop.
- The JmolViewer is a development tool kit that can be integrated into other Java applications.
Enhancements:
- Bug fix: load trajectory XXX.cif not applying fractional coordinates.
- Bug fix: load trajectory {0 -1 1} not loading any models if first model has 0 atoms (as in certain cif files)
- Bug fix: dipole offsetside not working for molecular dipole (EVER!)
- code: refactored scriptEvaluator and Jmol.java. Now it is much simpler to create a truly "headless" Jmol application, where Jmol is being used for the investigation of the structure instead of visualization.
- New application: JmolFrameless.jar: This application completely disallows any display -- it is totally formless. There are no Java Swing JFrames involved, no dialogs, no popup menus, no display of any kind.
- Script editor behaving properly except for a nasty SWING bug that will require recasting this in AWT instead of SWING. See http://bugs.sun.com/bugdatabase/view_bug.do?bug_id=4353673
- New feature: gamessUS reader now reads dipoles and partial charges.
- TODO script editor -- search? argh... I knew this would be a can of worms... script editor -- undo/redo works (CTRL-Z, then SHIFT-CTRL-Z or CTRL-Y)
- New feature: drag/drop and file menu-open scripts directly into editor, from where they can be checked or tested.
- Code: refactored readers, allowing for more obvious initialization/finalization methods
- New feature: App and applet consoles now have "editor" buttons that load scripts into a "script editor" and allow stepping through scripts (and changing values during the pauses) - preliminary only opens a rough draft ScriptEditor
- New feature: Gamess file reader now translates internal basis set and calculation methods representations into roughly literature standard for Pople & Dunning basis sets as well as perturbation, CI and CC calculation methods. This is dumped to calculationType.
- New feature: application console buttons: PAUSE, ?, STEP
- New feature: SHOW TRACE -- reports stack trace
- Bug fix: functions with names starting with _ were local instead of global
- Bug fix: 2 pixels off in y for labels. Dont know why I thought that was necessary in Text.java:setBoxXY.
- New feature: SHOW VARIABLES now gives variable trace through function stack
- New feature: [Oh, VERY COOL!] You can now pause the app anywhere in a script, do anything you want -- even within functions -- change variables, set parameters, anything -- and then resume with RESUME. Some of us have dreamt of having this with JavaScript. Very very useful!
- Bug fix: problems with PAUSE/RESUME within App
- Bug fix: "set ?" nonfunctional
- Bug fix: unmatched { in quotes in @{ } not properly treated: echo @{" testing}"}
- New feature: strings may start with or ", like JavaScript
- New feature: print getProperty("PDBInfo","REMARK300")
Requirements: Mac OS X 10.3 or later.
Jmol 11.7.45 Screenshot
Jmol 11.7.45 Keywords
Jmol 11.7.45
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Script Editor
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Jmol 11.7.45 Copyright
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