CLC Protein Workbench 5.1

CLC Protein Workbench provides a wide range of advanced protein analyses, and is based on the same user-friendly and integrated software environment as CLC Free Workbench.
CLC Protein Workbench is a software solution for scientists and lab researchers working with biochemistry.

Main features:
- Iintegrated 3D molecular viewer.
- 2 types of alignments.
- Phylogenetics.
- Secondary protein structure prediction.
- Signal Peptide Prediction (SignalP).
- Transmembrane helix prediction (TMHMM).
- Motif search (known patterns).
- Pattern discovery (unknown patterns).
- BLAST.
- Batch processing of multiple analyses in one work-step.
- Protein family analysis (PFAM).
- Dot plots.
- Hydrophobicity analyses.
- Antigenicity analyses.
- Searches on GenBank, Swiss-Prot, TrEMBL, and PubMed.
- Detailed log of actions/analyses performed.

System requirements:
- 256 MB RAM required.
- 512 MB RAM recommended.
- 1024 x 768 display recommended.

Version restrictions:
- 4 weeks fully functional trial period.

Enhancements
New features:
- Better feedback on processes: there is a tool tip showing details and start time.
- Translation of DNA to protein in sequence views can now be set to follow existing CDS/ORF annotations.
- Much improved memory performance and processing time of large data sets.
- Output and error log files are now placed in the application data directory in the user home.
Bug fixes:
- Fixed error when parsing files from Clone Manager (cm5-files).
- UniProt search works again.